Showing posts with label taxonomy. Show all posts
Showing posts with label taxonomy. Show all posts

Friday, December 03, 2010

Red Wolf ESPP Prints Released!


Christopher Reiger
"Constellation (Canis rufus)"
2010
Pen and sumi ink, gouache, and watercolor on Arches paper
15 x 12 inches

My 2010 drawing "Constellation (Canis rufus)" has been made into a limited edition print for the Endangered Species Print Project (ESPP). The drawing features the red wolf (Canis rufus), a critically endangered wolf species.

I wrote the following description of the red wolf and its plight for the ESPP website:
"The Red Wolf (Canis rufus) is a medium-sized North American canid, generally larger than a coyote but smaller than the gray wolf. As the common name suggests, red wolves often have reddish fur on and around their ears, neck, and legs. Like other wolves, the Red Wolf is a social species that lives in packs, groups typically comprised of a mated pair and their offspring (of multiple generations). Red Wolves are crepuscular predators, most active at dusk and at dawn. They prey on white-tailed deer, raccoons, opossums, rabbits, and rodents, but are also known to scavenge.

The Red Wolf once occupied a range that extended over the forests, swamps, and coastal plains of the southern and eastern areas of the United States, as far west as Texas and as far north as New York. As with most non-domesticated canines, however, the Red Wolf was vilified as a dangerous competitor of man (and, erroneously, a "man-eater"). These entrenched, negative attitudes gave rise to aggressive predator control campaigns; wolves were poisoned, shot, and trapped. This persecution was compounded by habitat loss and disease, taking a terrible toll on red wolf populations. By 1980, the species was extinct in the wild.

Today, though, there is good news. Thanks to several focused preservation and reintroduction programs, and especially to the efforts of the Point Defiance Zoo & Aquarium (PDZA) and the United States Fish & Wildlife Service (USFWS), in conjunction with programs like that at Mill Mountain Zoo, the Red Wolf is staging a small, isolated recovery. There are now approximately 100 wolves living wild in eastern North Carolina and up to 250 individuals in zoo-based captive breeding programs."
As per the ESPP model, this is a limited edition of 100 prints, the number determined by the featured animal's current wild population. The print measures 8 x 10 inches, and costs a mere $50.00. ALL proceeds from sale of the prints will be donated to the Port Defiance Zoo & Aquarium Red Wolf Recovery Program.

As I explain in the ESPP artist notes, my fascination with taxonomy increased my interest in researching this particular species:
"Ecology, wildlife biology, and natural history are subjects that I'm passionate about, and I'm especially intrigued by taxonomy, the classification of different species. The ever-evolving field's binomial nomenclature is chock-a-block with curious etymological backstories and, more importantly, taxonomists are endlessly debating species classification. Names change, species become subspecies (and vice versa), and protected animals become unprotected animals on what seems to be a month-to-month basis! The red wolf is no exception. It's an honor to produce an artwork that may, in some small way, help save a keystone predator from extinction and genetic isolation; I must admit, however, that I also planned to use the print as an excuse to learn more about the particulars of the red wolf taxonomic debate.

Some wildlife biologists insist that the red wolf's scientific name is Canis lupus rufus and that the animal is a subspecies of gray wolf (Canis lupus). Another camp, one that the US Fish & Wildlife Service concurs with, believes the wolf to be a species distinct from the gray wolf. It is their classification, Canis rufus, that I use in the species description above. Frankly, both groups make valid arguments; the different verdicts depend on whether the red wolf is classified according to the biological classification rule (i.e., if Wolf A can make viable pups with Wolf B, the two wolves belong to the same species) or the phenotypic/phylogenetic approach to classification, based on distinct physiological or genetic characteristics. Because the phenotypic/phylogenetic approach leads to a great many more species, it remains a source of contention within wildlife biologist communities and complicates conservation politics, for better and for worse.

Of primary importance, though, are the animals. Whether red wolves are ultimately deemed their own species or a subspecies of gray wolf, they're on the brink of extinction. There is ample cause for hope, however, and you can make that hope a little more concrete by purchasing a print!"
Visit the ESPP site to learn more and, during this holiday season, please consider helping the species by buying a print as a gift.

Friday, August 21, 2009

A Practice of Naming


Christopher van Donkelaar
"Adam Naming the Animals"
Handmade pigments and mixed media
2008
"Praise to the first man who wrote down this joy clearly, for we cannot remain in love with what we cannot name."

- Robert Bly
A lover of etymology and taxonomy, one of my most cherished reference books is Arthur Frederick Gotch's Latin Names Explained: A Guide to the Scientific Classification of Reptiles, Birds and Mammals. In it, Gotch catalogs and dissects the scientific names of some 4,000 animal species. That number appears relatively insignificant when we consider that biologists estimate 25,000 species of bird, mammal, and reptile currently exist on Earth, but Gotch's record is so far unparalleled. Each entry provides the animal's common and scientific names, followed by an explication of the Latin and Greek and, sometimes, a blurb about the species' range and habitat.

For example, consider Gotch's entry on one of my very favorite North American snake species:
Copperhead Agkistrodon contortrix
agkistrodon (Gr) a fish-hook; odon (Gr) a tooth; a reference to the curved fangs, though of course they are not barbed; contorqueo (L) I twist, turn; contortus (L) full of turns, twisted; contortrix (L) one that is able to turn, twist. Inhabiting the south-eastern part of the USA including Florida. The top of the head is reddish brown.
Although the range information suggests that the copperhead is more confined to the southeastern United States than the species and subspecies actually are - they thrive in New York State, for example - Gotch's entry informs readers that the snake commonly called a copperhead is universally and technically named Fish-hook shaped tooth twister or, if you prefer, The Twisting One With Hook Shaped Teeth. Knowledge of this name allows me to appreciate the beautiful reptile from another angle.

But what's in a name, really?

Although I'm generally baffled by Biblical literalism, I appreciate the Genesis accounts of creation for their gratifying metaphor. In particular, I'm drawn to rabbinic and Jewish mystics' interpretations of the conjoined, aboriginal narratives. More so than their Christian counterparts, Jewish theologians and mystics endow language and names with ontological significance. The Hebrew alphabet is understood as a powerful code: the written word is creative potential, and the spoken word, procreative. The god of Genesis 1 creates neither with a wave of the hand nor by shaping raw material, but by speaking the world into being; annunciation and incantation are the means of creation. Because of the vocative nature of naming, observant Jews place great value on words and speech. (They are even prohibited utterance of the tetragrammaton, the four-letter Hebrew name of God, transliterated as Yahweh. Appropriately enough, the colloquial name for God is Hashem, or "the word.")

In Genesis 2, the creator god is anthropomorphized and physically involved with creation, shaping man and the other animals from earth. Yet the power of language and names remains significant in this account. God asks Adam, the first naked ape, to name all of the other animal species. That's no mean task, and apparently Adam died before he finished the job. His descendants, at least the taxonomists among them, are still working at the task of naming.

But even those individuals who do not share my affection for taxonomy will find value in a practice of observation and naming. As Carol Kaesuk Yoon writes in her recent New York Times paean to taxonomy, "Reviving the Lost Art of Naming the World,"
"Even when scads of insistent wildlife appear with a flourish right in front of us, and there is such life always — hawks migrating over the parking lot, great colorful moths banging up against the window at night — we barely seem to notice. We are so disconnected from the living world that we can live in the midst of a mass extinction, of the rapid invasion everywhere of new and noxious species, entirely unaware that anything is happening. Happily, changing all this turns out to be easy. Just find an organism, any organism, small, large, gaudy, subtle — anywhere, and they are everywhere — and get a sense of it, its shape, color, size, feel, smell, sound. Give a nod to Professor Franclemont and meditate, luxuriate in its beetle-ness, its daffodility. Then find a name for it. Learn science’s name, one of countless folk names, or make up your own. To do so is to change everything, including yourself. Because once you start noticing organisms, once you have a name for particular beasts, birds and flowers, you can’t help seeing life and the order in it, just where it has always been, all around you."
Beautiful. Let's name something.

See also "The Plant Whisperer," another brief HH essay considering similar ideas.

Image credit: van Donkelaar painting ripped from the Nurturing Faith website

Thursday, March 23, 2006

Do You Feel Lucky, Pan sapiens?


There are a lot of reasons to be baffled by the renewed attacks on the theory of evolution(1), but I'm particularly bemused by the denialists' contention that the theory is a dangerous dogma. It's true that there's no shortage of dull-witted biologists who can be too stubborn in their pronouncements, as unwilling to consider a dissenting perspective as the loudest denialist(2), but any scientist worth her salt - or, for that matter, any informed, reasonable individual - realizes that the theory of evolution is, itself, evolving. Sure, some scientists can be dogmatic, but the theory in question is not a dogma. It is adaptable.

When most of us hear the word, evolution, crude caricatures of chimpanzees, Neanderthals, and walking fish-reptiles come to mind. Sometimes, we may even think of diagrammed cell division or an eukaryote propelling itself by means of rudimentary flagella. Yet rarely, if ever, do we consider change at the molecular level. Biophysicists Harold Morowitz, of George Mason University, and Eric Smith, of the Santa Fe Institute, do exactly that, suggesting that a "central set of chemical reactions has been in place since life's earliest moments about four billion years ago." Journalist Joel Achenbach explains the Morowitz/Smith hypothesis in a recent National Geographic piece, "The Origin of Life...Through Chemistry."
"These reactions involve just 11 small carbon molecules, such as citric and acetic acids, very ordinary stuff that would have been abundant on the young Earth. Those 11 molecules could have played a role in other chemical reactions that led to the development of such biomolecules as amino acids, lipids, sugars, and eventually some kind of genetic molecule such as RNA."
What makes the hypothesis so fascinating, though, is the suggestion that survival of the fittest or, more accurately, natural selection, occurs at the molecular level. Acenbach clarifies: "Some types of molecular chains outcompeted other molecular chains for the planet's resources, and gradually they led to the type of molecules that life depends upon - all this before the first living thing oozed forth." Wow! It seems obvious, really. Of course molecules compete in the same way genes do.

Unmentioned in the Geographic article is the divide between Millerites, evolutionary biologists who stand by Stanley Miller's mid-twentieth century hypothesis that life began at surface level, when electricity, atmospheric gases, and water interacted in such a way as to form the oft-mentioned biotic soup, and ventists, the scientists who feel such a soup was more likely arrived at on the ocean's floor, a by-product of interactions involving pressure and heat near hydrothermal vents. (I prefer to think of the two perspectives as the Frankenstein approach (electricity) and the oven hypothesis (hydrothermal) and, although I remain uncertain of which I "support," when the two camps duke it out the Frankenstein approach always seems to be forced back against the ropes.) Morowitz and Smith are ventists. Will their molecular metabolism hypothesis, viable both on the surface and under the sea, come under fire from Millerites because they are "the enemy"?

Such language - "duke it out," "the enemy" - is hyperbolic, but most folks would be shocked by how nasty the debates in the halls of evolutionary biology can become. Whatever impression the more extreme denialists seek to convey (e.g., Darwin was a blasphemer who today inspires countless secularists, marching in lockstep, to carry on his unholy work), the theory of evolution is anything but settled. Darwin's theories provide a spring board, an introduction, but are not fast. As with most revolutionary science, Darwin's ideas raise a host of questions.

One of these questions, in particular, has plagued biologists ever since Darwin's theory was first published. Commonly referred to as the "paradox of evolution," it asks, how can we reconcile evolutionary variation - all the shapes, colors, sizes, etc. - with the limited number of structures and systems all species share? The two readily observable realities seem contradictory: unlimited diversity produced by a limited system. Marc Kirschner, chair of the Systems Biology Department at Harvard Medical School, recently proposed a novel answer, facilitated variation. I turn to Robin Marantz Henig's article, "Resolving Evolution's Greatest Paradox," in the March/April 2006 issue of New York Academy of Sciences Update.
"Kirschner used an analogy borrowed from the kindergarten classroom to explain how his and Gerhart's theory differs from evolutionary theory up to this point. Traditionally, he said, biologists have compared life to a lump of modeling clay, 'incredibly plastic, and able—due to the accrual of many small changes—to go in any direction.' But this is the wrong metaphor, he said. In truth, life is more like a bunch of Lego blocks. As with Legos, the basic building blocks of biology are rigid and quite similar to one another, but 'there is a large variety of structures that can be assembled from similar parts.'

Another way of looking at it, Kirschner said, is to try to imagine trying to get a monkey to write the word 'MONKEY.' You could do so by giving the monkey a pen and paper, but that would never work—all you'd get would be 'random lines and scratches.' But if you gave him a typewriter, then you might be getting somewhere. It would take a very long time (Kirschner calculated about ten years, typing at the rate of one keystroke per second round-the-clock), but the monkey would eventually produce all six letters in the right order, because the typewriter restricts the results of his physical actions—always letters instead of scribble-scrabble. 'Letters have at least a chance to be useful,' Kirschner said. 'Most pen scratches do not.'

If, instead of a typewriter, the monkey was pounding on a computer keyboard programmed with an automatic spelling corrector, the time it would take for him to type out the word 'MONKEY' would be reduced dramatically, from ten years to probably less than a single day. 'More constraint equals more useful outcomes,' Kirschner said."
OK. That's clear, but how can the spell checker analogy account for so much complexity and variation?
"Complexity in multicellular organisms—changes and refinements in beak shape, pigmentation, jaw structure, limb formation—can be explained, he said, by forces involved in 'changing the time and extent of a process rather than creating a new process.'...[This] helps account for the surprising fact that the human genome isn't much bigger than the genome of a frog or a fruit fly. The vast differences among these organisms are accounted for not by number of genes, he said, but by how the genes are expressed...In other words, the gene itself doesn't have to be different; what changes is the timing or location of the gene's expression."
Beautiful! One need look no further than the gestation of a human embryo to get a sense of how facilitated variation works, each step recalled and repeated, generation after generation, the species' genome receiving new information all the while. The same "program" is "running" inside frog eggs or the squirrel's womb.

Still, it's important to note that facilitated variation is but a piece of the ever-changing puzzle, no more or less important than punctuated equilibrium or the notion of spandrels. Moreover, though a lovely marriage of genetics and natural selection, Kirschner's theory is less applicable when considering a restricted time line.

"Global Warming Fuels Speedy Evolution," a piece by Larrry O'Hanlon (Discovery News), provides readers with a number of recent, documented cases of dramatic changes in animal phylogeny. Within the past seven years, the cane toad (Bufo marinus) population in Australia - an introduced, destructive species - has evolved longer legs, an adaptation that has made the species considerably more mobile, enabling them to more quickly expand away from the introduction point. Longer legs equals more ground covered which, in turn, means access to virgin territory and plentiful food. In short, further colonization. Not surprisingly, some native Australian snake species viewed the new arrivals as prey. After swallowing the amphibians, however, these reptiles would ingest the toad's toxin and - pardon the pun - croak. Amazingly, in the same seven-year window, these snake species have, via natural selection, developed smaller jaws, thereby preventing them from eating the toads and ingesting the toxin. All this change in seven years and across several unrelated species!

Invasive species aren't the only reason for accelerated, or rapid evolution, as it is officially called. Global warming (better termed climate change) is a prime mover, too.
"Research on toads, frogs, salamanders, fish, lizards, squirrels, and plants are all showing evidence that some species are attempting to adapt to new conditions in a time frame of decades, not eons, say biologists. What's more, one of the biggest reasons for all this evolution right now may be that human-induced changes to climate and landscapes give species few other options....The first known case of a mammal responding genetically to warmer climate warming is the red squirrel of the Yukon Territory. Canadian scientists have discovered that red squirrels are giving birth about 18 days earlier than their great-grandmothers. It's the early squirrel that gets the nut, after all: natural selection in action. 'Climate change is going to be a massive agent of evolution,' said ecologist and rapid evolution researcher David Skelly of Yale University."
Rapid evolution provides more evidence for the punctuated equilibrium hypothesis, suggesting that, when need be, species have the ability to adapt much more quickly than paleontologists, geneticists, and evolutionary biologists originally believed possible. The gaps in the fossil record, so often highlighted by denialists as proof of evil-ution's failings, are easily accounted for when we observe, in the space of just one decade, significant phylogenetic changes within a given population.

All of these observations and new hypotheses are very exciting to me, but I realize a portion of the folks reading Hungry Hyaena, maybe even the majority, find this round-up rather esoteric. I thought it only sensible, then, to wrap up by bringing evolution closer to home or, in this case, closer to man. Biologist Soojin Yi (Georgia Institute of Technology, Atlanta) recently confirmed that both species of chimpanzee (Pan troglodytes and Pan paniscus) are more closely related to humans than previously assumed. In fact, as I've argued often, it looks as though the taxonomy will have to be changed. Homo sapiens will no longer be alone in the genus; Homo troglodytes and Homo paniscus will soon be joining our private party!

I hope this announcement will provide a reality check for our unfathomable human hubris, but, as incredibly happy as I am about it, I'm not altogether satisfied about where it will lead. As I see it, humans should move genus, not chimpanzees. Our species should be dubbed Pan sapiens. In other words, we should willingly discard our crown and step down to join the great unwashed, honest at last when regarding our reflection. I'm not alone in feeling this way. Andrew Rambaut, an evolutionary biologist at Oxford University, says, "It seems a bit human-centric to want to put chimps into the 'Homo' genus and not reclassify humans as 'Pan.'" Jared Diamond, the acclaimed author of Guns, Germs, and Steel and, more recently, Collapse, wrote an excellent, lesser known book in 1991, titled, The Third Chimpanzee, in which, among innumerable salient points, he suggested we do away with the arbitrary Homo delineation. After all, every ape relies on the same damned spell checker.

(1) Some folks refer to intelligent design as "the fourth wave" of resistance. The first wave of opposition dates back to the 1860s, when the theory was nascent and controversial. The second wave, during the 1920s, culminated with the Scopes Trial. Then, in 1987, the Supreme Court ruled against mandatory teaching of creation science - Edwards v. Aguillard - effectively putting an end to the third wave.

(2) Reading "Evolution In Action" (Sid Perkins, Science News, Feb. 25, 2006), I was struck by the us-versus-them tone prevalent throughout the article. The reactionary posturing of some scientists - and, in this case, a science journalist - can take on a disturbing tone: "From 2001 through 2003, anti-evolution activity was reported in 40 states." Anti-evolution activity? Reported? The witch-hunt has begun!

Photo credit: Ripped from brainfuel.tv

Thursday, May 19, 2005

"Misjudged Hyenas"


I would be remiss were I not to draw attention to the June 2005 issue of National Geographic. "Misjudged Hyenas" showcases photographs of Crocuta crocuta.

The Latin name drips off the tongue; equal parts sensuality and mystery, it sounds almost vampiric, but the animal itself is anything but sensual. In fact, it is in part the raw ugliness of the animal that so attracts me to them. Muscular and equipped with impressive jaws, these slope-backed animals have long been characterized as pathetic, stupid scavengers. This couldn't be more inaccurate an assessment. Biologists have known for years that hyenas are excellent predators. More recently, we learned that they have an extremely complex social hierarchy, far more sophisticated than that of lions and, according to some biologists, approaching that of ape species.

More closely related to the mongoose than to the bear or dog, hyaenas belong to the cat-like superfamily (or suborder, depending on your preference) of carnivores, Feliformia. Curiously, the spread on pages 62-63 of the June issue makes clear this relationship. In the image, a hyaena has been trapped in a bog by a pair of male lions and they are preparing to kill the smaller predator. The hyaena is covered with glistening mud and rears back in a futile defensive display. Muddied as he is, the physiological similarities between the mongoose and the hyaena are made clear.

At any rate, when I began this blog, I promised a longer post on this fascinating animal. One is forthcoming.

Photo credit: Anup and Manoj Shah, 2004

Sunday, April 03, 2005

In Brief: Taxonomy, Natural Selection, "Pets"

Chris, at Organic Matter, offers this thoughtful post about taxonomy, one of my favorite messes. The current debate over species organization is concerned with two possible modes of classification. The Biological Species Concept (BSC) is based on breeding potential (that is, if duck A can make a duckling with Duck B, the two birds are the same species). The BSC results in fewer distinct species, but some biologists insist that it is overly simplified. The Phenetic and Phylogenetic Species Concept (PSC) are based on distinct characteristics, both genetic or physiological; it makes for many more distinct species, but requires an extensive overhaul of the current arrangement. Still other biologists call for a unitary, web-based alternative, a kind of Wiki-taxa open to all users, but designed and funded by an international committee of serious taxonomists. Whatever system biology opts for, confusion is likely to remain constant for a long while. What will such biological debates mean for conservation biology at large? Politicians love simple answers to complex questions; taxonomy, like most sciences, has few simple answers...unless, of course, we fudge the science. (See also Dave Roberts' post at Gristmill.)

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Observable instances of natural selection don't get much better than this. In the November 29, 2004 issue of PNAS (Proceeding of the National Academy of Sciences), Ben Phillips and Richard Shine published this study (unfortunately, you can only read the abstract) on the effect of cane toads (Bufo marinus), an introduced species, on native Australian snake populations. Because the toads are large and toxic when full grown, snakes capable of swallowing the adult cane toad are more likely to be poisoned. Since the introduction of the cane toad in 1935, snake head sizes have been gradually shrinking relative to body size. You gotta love this stuff! Those folks dunderheaded enough to still decry evolutionary theory are also missing out on the fun!

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Are you into exotic pets? If so, you're not alone. With nearly 7,000 tigers kept as pets and only 2,500 remaining in the wild, it's clear that more and more people are bringing wild animals into their homes. As a keeper of multiple pythons and, at various times throughout my life, Northern flying squirrels, European starlings, Eastern box turtles, snapping turtles, and several species of snake, frog, and toad, I understand the desire to keep wild animals in captivity. One can learn a lot about animal behavior and develop a life long love of other species. But I think it cruel in all but the most exceptional cases and, although I'd like to keep a starling or crow again, I view these animals less as pets than as creatures in my care. (Reptiles and amphibians, if reasonably sized, do fairly well in captivity, but I get very upset when I see a reptile owner being careless with temperature/humidity control or mishandling the animal.) Their needs are often specific and unusual and I fear most people purchasing a caracal or kinkajou don't think about long-term commitment; these animals are impulse buys.

I'm reminded of the "Mr. Show" "Sulu the Iguana" skit in which David Cross gets angry at his "pet" iguana for knocking over his bong, beats it to death with an encyclopedia, and then sobs over the reptile's body. Undaunted in his quest to be the most "original" pet owner, however, David buys a "real, live albino boy" to replace the iguana. Funny though it may be, it accurately depicts the selfish impetus of many exotic pet owners.

Tuesday, March 29, 2005

Wood Frogs and Me


I am impressed by cold-blooded creatures that have adapted to cool climates and the wood frog (Rana sylvatica), one of my favorite amphibians, is such a species.

The watercolor posted above features a wood frog, and is part of a series that I'm currently working on. Comprised of many small watercolor paintings tacked to a wall, the series is basically a bastardized taxonomy. In the picture below, you can see one wall of the series, whereby the various species and individual humans have been grouped according to behavior rather than biological type, physiology,or phylogeny. I hope to make viewers question anthropomorphism while at the same time poking fun at the inadequacy of our taxonomic systems.

Also, while we're on the subject of wood frogs, this short article in National Geographic discusses the ability that has allowed wood frogs to thrive in cold climates. Incredibly, they have mastered the delicate art of cryogenic freezing.



Image credits: Christopher Reiger, 2005